Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MICQRCGENKAVIALQQLNELGKVESLYLCENCATDEALSSEKDLVKAMDTFSEVALDFLTLLQKEENTQKEVVCENCQLSFEEFLKTNRVGCPECYSAFEAQLVPIIGRVQNGYKKHIGKVPAEVERAEGVQNEISRLQEKLAKLVKNEEFEEAAVVRDEIKALKAGGEDK
4CKK Chain:A ((232-268))
----------------------------------------------------------------------------------------------------------------------VHEIPYQVNKA--------RLIEKIAELVKEKRVEGISALRDE-----------
General information:
TITO was launched using:
RESULT:
Template:
4CKK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5665 for 143 contacts (-39.6/contact) +
2D Compatibility (PS) -3807 + (NN) -3079 + (LL) 10476
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -6025.0 ( -42.13 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_4CKK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CKK-query.scw
PDB file :
Tito_Scwrl_4CKK.pdb
: