Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNLFLTSSFKDVVPLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRKNDFIYVTGGNTFFL-LQELKRTGADKLILEEIAAGKLYIGESAGAVITSPNIAYIQTMDSTKKAVNLTNYDALNLVDFSTLPHYNNTPFKEITQKIVTEYAGKSQIYPISNHEAIFIRGKEVITKRLS |
1GPW Chain:B ((2-94)) | ---------------------------RIGIISVGPG------NIMNLYRGVKRASENFEDVSIELVESP----RNDLYDLLFIPGVGHFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQLLFEES---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GPW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28072 for 635 contacts (-44.2/contact) +
2D Compatibility (PS) -10246 + (NN) -5888 + (LL) 8384
1D Compatibility (HY) -4400 + (ID) 450
Total energy: -40672.0 ( -64.05 by residue)
QMean score : 0.340
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