Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVFAEYLAEIENPDHRARTQEVLTWVAETFPDLKPEIK--------WNTPMFTNNGTFIIGFSIAKQHMSVSPEVAGIERFEADIKEAGYSHTKGIFRITWAKSVDYDLLAKIIKFNIQDKANYTSFWRV
1CSR Chain:A ((260-319))
---FAAAMNGLAGPLHGLANQEVLLWLSQLQKDLGADASDEKLRDYIWNT---LNSGRVVPGYGHA-----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1CSR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1986 for 237 contacts (8.4/contact) +
2D Compatibility (PS) -5450 + (NN) -3121 + (LL) 5828
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -4457.0 ( -18.81 by residue)
QMean score : 0.270
(partial model without unconserved sides chains):
PDB file :
Tito_1CSR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CSR-query.scw
PDB file :
Tito_Scwrl_1CSR.pdb
: