Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRQYMKMVRPFDFVIIILLILGSFLPLILFSVAEAKHVGDDVVAIISQDGKVIREIPLTGHKGNEQFTIKGKGAQYNLMEVDGERIRIKED-NSPDQVGVKMGWKSKAGDTIVCLPHKVFVEIKSTNKKSKDPDTDLIVPN |
4PJE Chain:E ((76-155)) | ---------------------------------------------------LLKELQM---KDSASYLCAGMDSNYQLIWGAGTKLIIKPDIQNPDPAVYQLR---------VCL----FTDFDSQTNVSQSKDSDVYI-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PJE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -620 for 280 contacts (-2.2/contact) +
2D Compatibility (PS) -6951 + (NN) 3317 + (LL) 5180
1D Compatibility (HY) -7200 + (ID) 950
Total energy: -7224.0 ( -25.80 by residue)
QMean score : 0.286
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