Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRKIIAVTACATGVAHTYMAAQALKKGAKKMGNLIKVETQGATGIENELTEKDVNIGEVVIFAVDTKVRNK----ERFDGKVVLEVPVSAP-IKDAEKVINAALALIDEK
1E2B Chain:A ((3-102))
-KKHIY--LFSSAGMSTSLL-VSKMRAQAEKYEVPVIIEAFPETLAGEK-----GQNADVVLLGPQIAYM-LPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAAIKK-
General information:
TITO was launched using:
RESULT:
Template:
1E2B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27760 for 761 contacts (-36.5/contact) +
2D Compatibility (PS) -10596 + (NN) -6741 + (LL) 992
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -48955.0 ( -64.33 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_1E2B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E2B-query.scw
PDB file :
Tito_Scwrl_1E2B.pdb
: