Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------MTTIFPKEQNVTPLFEQI-LANPTACRRFKDVFLDNLESYQETRGFEKDDTLFAKI----ILSAYRQSDVSALLLGVCGRTLFELLRQAFLIPKKLTVDNPFFLTDKEGNFIAKKDDISNREQEKFQEIYQSDLHHSETTIFLVDDDDIVHSYEPDFSISTKRINKKRGILVLYSLPDTLKSGMTESEVYAFIWKTFLHIQEIIPSSRIFYGQETSENADELGVFLPIHHFEKKMLQNIEQV-NELVDALREQMVNK------------------------------------------------------------------------------------------------------------------------------------------------------ |
| 4OFZ Chain:A ((85-513)) | QTVDDFKNLMYKMQETRRAIVFALLNEKDLTKDDVEILKRAYEKLTDNFQREMCTLTTKLSVNIGDETRGLEKDLKYLDALMNIRREEPNLLWPIIMSRVDLFSILANYHPKGKETFLKEY--EDTVKFLK-TFISSEAITGKKPIFITDWDGTM---KDYCSQ---------YATNL---QPVYSAVGMTRFAASFTRISAVLTAGPLRGPGILDLTAMP------IDGPVMFSGSWG-----REWWLSGKRVVHQDGITD----EGFNALQRLDDEMKDLLHTSPFALVGSGVQRKVDRLTLGVQTVCHHVTSELSNRYQMAVKERMHNSQILVFDPSTELEVEVVAHNSGIIWNKGNGVERLIKSLGDSLQSPGKILICGDTLSDIPMVRQAVKQNPDGVLAIFVGAKMSLREEVKQVIGDESRCCFVSCPDVIHAAMSQILNEHCIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OFZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15228 for 1404 contacts (-10.8/contact) +
2D Compatibility (PS) -22451 + (NN) -2939 + (LL) 2500
1D Compatibility (HY) -10400 + (ID) 2050
Total energy: -50568.0 ( -36.02 by residue)
QMean score : 0.263
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