Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKALKLYGKRDLRYEEADMPTIEEPDDVILKVKTVGICGSDISRYS--KLGPYV--PGMVWGHEFSGEVIEVGSEVTDIEIGDRAAGCPALYCGECEYCKKGEFARCRKLTVIGARHP--GAYAEYIKLPAENVVKIPNELDYEAAALVEPSAVVVHGFYHTKLQAGDDVVVVGSGNIGLLAIQWAKVFGARRVIAIDVDDKKLALAKEVGADV--VINSLKEDPLEVVAAHTDGLN--ADLVVEAAGSPITSAQVFAYAKKGGGVVFLGIPYADVTIERFYFEKIVRSELTVWGSWNAISAPFPGKEWQTTIHFLANKQINIEPMITHRLSLAEGPEVFERIYERNEFFGKVLFFPE |
| 1E3J Chain:A ((10-347)) | -----LYKQNDLRLEQRPIPEPKE-DEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC-ATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVP---LVNACAREIDIKSVFRYCN------DYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E3J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231677 for 2851 contacts (-81.3/contact) +
2D Compatibility (PS) -34203 + (NN) -4429 + (LL) 752
1D Compatibility (HY) -29200 + (ID) 4950
Total energy: -303707.0 ( -106.53 by residue)
QMean score : 0.497
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