Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQIFPAIDLKNGQCVRLFQGDFSKKTVVNEDPIAQAKAFATDGATYLHIVDLDGALEGRPINLEVIQKMKITAKIPVQVGGGIRSMAQVDYYLESGIDRVIIGSAALTDPDFLRAAVQKYGAK-IAAGIDAK-NG---FVATRGWLDVSQVSYLDLAKRMEKVGVETIIYTDISRDGTLTGPNLEQMANLKEHVKVNLIASGGVSSRADLEALAQLGLYGAIAGKALYNHHISMSDIVEVEQIAY
1H5Y Chain:A ((5-206))
LRIIPCLDIDGGAKVVVKGVNFQGIREVG-DPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSVRIPVIASGG------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1H5Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118530 for 1599 contacts (-74.1/contact) +
2D Compatibility (PS) -21947 + (NN) -11798 + (LL) 3812
1D Compatibility (HY) -11200 + (ID) 3000
Total energy: -162663.0 ( -101.73 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_1H5Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H5Y-query.scw
PDB file :
Tito_Scwrl_1H5Y.pdb
: