Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHKHHLSKKLFFAGLVLFIIGAIGVAFTMNTGKMIEKGEPLTKQWDLSTENIKKIAFSSERDASIEWKESTTGKNYIELKGNYSANDKKAIQQLEPVSEDGTSFDITVPEEDDWYNGFGKIYAY-GKQKVTIYLTKDTKLADLEVKSHSGDIDVA-DFK-VKKFVSSTNSGELKVTNLEANTAQMATSSGDLTLSNIKANSSIETDSGKTELTNLTGDLEVNGGSGDVNVAGVKAKKLKIAIDSGDIELTSGTVTDLAVLTTSSGDIDANTKGKIQAESDSGSIELAGATNNVTAKTSSGDIDVAFTKQVKNIEINSDSGEVELELPGDFKAIYEASSNSGSVKAPTSDSNTDNRVTVKTSSGDIKIEK |
4O3Z Chain:A ((353-511)) | ------------------------------------------------------------------------------------------------------------------YMKFGQLWQKEGEQ------TKDNSLFLQGERTATDKIPVGGNYKYVGTWDALVSKGTNWVAEADNNRESGYRSEFDVNFGDKKVSGKLFDKGGIVPVFMINADIKGNGFTGTANTTDTG-----FALDS---QHGNAVFSDIKVNGGFYGPTAGELGGQFHHKSDNGSV------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O3Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 36585 for 1075 contacts (34.0/contact) +
2D Compatibility (PS) -15603 + (NN) 1872 + (LL) 12140
1D Compatibility (HY) -3600 + (ID) 1800
Total energy: 29594.0 ( 27.53 by residue)
QMean score : 0.104
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