Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEGEIPEKYRSVDEEEINRSFGGSLPAVHAVVKSYLQIIWVTKWTE
2XVC Chain:A ((23-54))
---------GGFLDIEHFSKVYGVEKQEVVKLLEALKNKGL------
General information:
TITO was launched using:
RESULT:
Template:
2XVC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3186 for 143 contacts (-22.3/contact) +
2D Compatibility (PS) -3441 + (NN) -1022 + (LL) 1272
1D Compatibility (HY) -1200 + (ID) 200
Total energy: -7777.0 ( -54.38 by residue)
QMean score : 0.236
(partial model without unconserved sides chains):
PDB file :
Tito_2XVC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XVC-query.scw
PDB file :
Tito_Scwrl_2XVC.pdb
: