Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LVIENRDFIQISTEKIKKEINNQKLVEMYKRCMENTLDTTIKIR----DSGLTFILTGDIPAMWLRDSVCQVRPFLIFAKENEEIESMLIGLSKEQVSLVEIDPYANAFNETP-NGAGHQADKTEMHPQVWERKYEIDSLCYPIQLAYLIWKITGRTEQFDAAFFKMLQTIFALWEVEQHHETKSPYRFERLDCVPSDTLKRNGLGTETAYTGMLWSGFRPSDDACEYGYLIPSNMFAVVVLGYAKEIIEAFYPSEIETIKQAATLQNDIQLGIEKFGTYNHPTFGEIFAFEVDGLGNQLLMDDANVPSLLSMPIIEYLEKESPIYQNTRKFILSKSNPYYFEGKLAKGIGSPHTPAGYIWPIGLAIQGLTASDKSEKLEILQMLLRTDAGTGLMHESFHPDYPEDFTREWFSWANMMFCELVLDVAGFRMANVLKN |
3P2C Chain:A ((30-460)) | ----RSNAVEKEILRVQKLLKNAKLAWMFTNCFPNTLDTTVHFRKGSDGKPDTFVYTGDIHAMWLRDSGAQVWPYVQLANSDPELKEMLAGVILRQFKCINIDPYANAFNDGAIPDGHWMSDLTDMKPELHERKWEIDSLCYPLRLAYHYWKTTGDASIFNEEWIQAITNVLKTFKEQQRKDGVGPYKFQRKTERALDTVSNDGLGAPVKPVGLIVSSFRPSDDATTLQFLVPSNFFAVSSLRKAAEILEKVNKK-TALSKECKDLAQEVETALKKYAVYNHPKYGKIYAFEVDGFGNHHLMDDANVPSLLAMPYLGDVNVNDPIYQNTRRFVWSEDNPYFFKGKAGEGIGGPHIGYDMVWPMSIMMKAFTSQNDAEIKTCIKMLMDTDAGTGFMHESFHKDNPKKFTRAWFAWQNTLFGELILKLVNEGKVDLLN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P2C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -246966 for 3933 contacts (-62.8/contact) +
2D Compatibility (PS) -45196 + (NN) -25140 + (LL) 700
1D Compatibility (HY) -36400 + (ID) 9000
Total energy: -362002.0 ( -92.04 by residue)
QMean score : 0.517
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