Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VNPAYFVLLVEELKTKYLVKDICQILQVPLSTYYRWKKKDFSQSSLEKKIGQLCKAYQFTYGYRKIAALMKQEEQVGINKVQRIMQKYQWQCQVKVKKKNRPGSAYYQTENHLNRNFQASQPLEKLTTD-ITYLYFGDCRLYLSSIMDLYNGEIVAYSIGEKQDTELV--LDTLNQLSLPEGSLLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNAPIECFHSSLKCETFYHKTAYKYAKSIVIQIVKDYIKYYNEKRIQQKLGYQSPINFRKQAA |
| 3OYD Chain:A ((117-231)) | ------------------------------------------------------------------------------------------------------------------RPDRPQKPFDKFFIDYIGPLPPSQGYLYVLVVVDGMTGFTWLYPTKAPSTSATVKSLNVLTSIAIPK--VIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGKVERKNSDIK-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16898 for 809 contacts (-20.9/contact) +
2D Compatibility (PS) -11975 + (NN) -6242 + (LL) 13956
1D Compatibility (HY) -4000 + (ID) 1400
Total energy: -26559.0 ( -32.83 by residue)
QMean score : 0.180
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