Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNILLICGSGA-SSGFMAAAIRKAAKKRGEQVTVKAASESQIDERINEIDYLLIGPHLAYMLDDLKQKVADKDVLVSIIPQATYGTLNGEKALDLILNMEG
2L2Q Chain:A ((4-103))
SMNILLVCGAGMSTSMLVQ-RIEKYAKSKNINATIEAIAETRLSEVVDRFDVVLLAPQSRFNKKRLEEITKPKGIPIEIINTIDYGTMNGEKVLQLAINAF-
General information:
TITO was launched using:
RESULT:
Template:
2L2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76528 for 705 contacts (-108.6/contact) +
2D Compatibility (PS) -10913 + (NN) -4350 + (LL) -28
1D Compatibility (HY) -7200 + (ID) 1650
Total energy: -100669.0 ( -142.79 by residue)
QMean score : 0.646
(partial model without unconserved sides chains):
PDB file :
Tito_2L2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L2Q-query.scw
PDB file :
Tito_Scwrl_2L2Q.pdb
: