Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTSIIERIDAWAEKTPDFPCYEYAGTRLSYKELKRQSDAFGSFLLKNLITDKEKPIIVYGHMSPLMLVAFLGSIKSGRAYVPVDVSMPVERIEQIKKAADPSMFICTEELPNNLTITGC-PVLTQDQLMDALEKHFGEVPDKEA--CVNNDDNYYIIYTSGSTGNPKGVQISQNNLVSFSNWILQDF-SLSQGLRFLNQAPFSFDLSVMDLYPSLLSGGTLV-----PLDKTITANMKDLYREIPAQNLDVWVSTPSFADLCLLDENFNQENNPRLTRFLFCGEVLAKKTASELLDRFPDAVIYNTYGPTEATVAVTQVKVTREIIDAYPSLPLGVIKPDMRLHIVDQETGEVLPEGEKGEIVLIGASVSKGYLNEPEKTDQVFFD--YKG--YQAYRTGDSGIIKD-GYLFFQGRLDFQIKLHGYRIELEDIENNLKKVSYIQNCAIIPKMKDEKVDMLVAQVIPTTHDFEKEYQLSAAIKKELKEFMPAYMIPRKWIYKTDFPLTMNGKIDRKSLNSEVNK |
| 4DG8 Chain:A ((55-507)) | ------------------------------YRQLLDSAEQLSDYLLEH-YPQPGVCLGVYGEYSRESITCLLAILLSGHHYLYIDLKQPAAWNAELCRQVDCRLILDCSTTPTPANGLPCVPV-----------RHLPAAPASVARPCFAADQIAYINFSSGTTGRPKAIACTHAGITRLC--LGQSFLAFAPQMRFLVNSPLSFDAATLEIWGALLNGGCCVLNDLGPLDPGV---LRQLIGERGADS--AWLTASLFNTLVDLDPDCLGG----LRQLLTGGDILSVPHVRRALLRHPRLHLVNGYGPTENTTFTCCHVVTDDDLEE-DDIPIGKAIAGTAVLLLDEHGQEIAEPDRAGEIVAFGAGLAQGYRNDAARTRASFVELPYRGRLLRAYRTGDRARYDEQGRLRFIGRGDGQVKLNGYRLDLPALEQRFRRQPGILDCALLVRERNGVKQLLCAWTGKAD-----------ASPQALLRQLPTWQRPHACVRVEALPLT----LDRAAL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -223615 for 3579 contacts (-62.5/contact) +
2D Compatibility (PS) -46505 + (NN) -17041 + (LL) 4632
1D Compatibility (HY) -24800 + (ID) 6250
Total energy: -313579.0 ( -87.62 by residue)
QMean score : 0.519
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