Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTMDDIVREGHPALREVATEVTFPLSDEEKKLGRDMLEFLINSQDEDLAEKYGLRGGVGIAAPQLAVTKRFLAIHVHDEKDRLYSYVLYNPKIRSHSVQQACLSGGEGCLSVDREVPGYVVRSERVTIDAFDENGTPLKLRFKGYPAIVIQHEIDHLNGIMFYDHINKENPSYLPPDVDVFG
3UWB Chain:A ((43-150))
---------------------------------------------------------GIGLAAPQVGINKRVIVVDETTEEHGKYAHLMVNPKITWKSEEKVLFD--EGCLSVPDQ-NGEVLRPKSIKVTFQNKDGKYKKWKLDGLAARVVQHEIDHLEGILFVDYFN---------------
General information:
TITO was launched using:
RESULT:
Template:
3UWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53300 for 756 contacts (-70.5/contact) +
2D Compatibility (PS) -11272 + (NN) -1683 + (LL) 3936
1D Compatibility (HY) -10000 + (ID) 2050
Total energy: -74369.0 ( -98.37 by residue)
QMean score : 0.335
(partial model without unconserved sides chains):
PDB file :
Tito_3UWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UWB-query.scw
PDB file :
Tito_Scwrl_3UWB.pdb
: