Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELKHVIPNMEKTFGQLEFAGEGKVEQRRINGKPTILSRSYNLYSNIQRADDIVVILPAEAGEKHFEIEQKVKLVNPRITA--EGYKIGTRGFTNYVMYADDIVKV
1D1A Chain:A ((666-700))
------------------------------------------------------------------KLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYAD-----
General information:
TITO was launched using:
RESULT:
Template:
1D1A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 667 for 111 contacts (6.0/contact) +
2D Compatibility (PS) -3287 + (NN) 130 + (LL) 5184
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -1206.0 ( -10.86 by residue)
QMean score : -0.200
(partial model without unconserved sides chains):
PDB file :
Tito_1D1A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D1A-query.scw
PDB file :
Tito_Scwrl_1D1A.pdb
: