Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQIGKVTGSLWATRKDEKLNGLKLLLVEICTDETEDVRHSIVAADNAGAGNGDLVLVTTGSAARASTGDNTIPVDACIVGIIDSVERYG
4I7A Chain:D ((1-86))
MYLGKVIGTVVSTSKNESLSGTKLLVVARLTEKLIPDGSTQVVVDTVGAGNGEIVIVSCGSSARQS----HSVIDAAVVGIVDTVE---
General information:
TITO was launched using:
RESULT:
Template:
4I7A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53086 for 526 contacts (-100.9/contact) +
2D Compatibility (PS) -8828 + (NN) -3326 + (LL) -256
1D Compatibility (HY) -6400 + (ID) 1850
Total energy: -73746.0 ( -140.20 by residue)
QMean score : 0.642
(partial model without unconserved sides chains):
PDB file :
Tito_4I7A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I7A-query.scw
PDB file :
Tito_Scwrl_4I7A.pdb
: