Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKKNLRMLALGFLISAVVLLVYNQFFSTQTKADETKATSTKAGSDENSSTWKNKYEKLLAQQEVDKATEAEAKKKAEEDAKKKAEEAKKVKSYTLKISKGDP------SSKAGDELQANGIIKSASDFD-----KYLRDNDYEKYIRD-----GSYNLK--SDMSYETIAKILTHKN |
| 1SU8 Chain:A ((349-468)) | ---------------------------------------------------------VITTMEMSKITGATHVNFAEEAAVENAKQILRLAIDTFKRRKGKPVEIPNIKTKVVAGFSTEAIINALSKLNANDPLKPLIDNVVNGNIRGVCLFAGCNNVKVPQDQNFTTIARKLLKQN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SU8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 29188 for 431 contacts (67.7/contact) +
2D Compatibility (PS) -10063 + (NN) 1812 + (LL) 4184
1D Compatibility (HY) -3600 + (ID) 1650
Total energy: 19871.0 ( 46.10 by residue)
QMean score : 0.259
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