Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VQQINWKKNVSFRSGSPAFTLLETILSITIILSISLLIPLFFQCYNKTIQLSNIDQTTEWQLFLIQTRLELEKATNIQIDGNKLSFSNGKDLITYSKYNDLVRRQVNGKGHEPLLTNVKDYQLIKKEKQLHLTVQDSNTQIYTSVFALPEVVSNP----- |
| 1CMO Chain:A ((52-178)) | VEVLADHPGELVRTDSPNFLCSV--------LPTHWRSNKTLPIAFKVVALGDVPDGTLVTVM----------AGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRG---------------KSFTLTITVFTNPPQVATYHRAIKITVDGPREPRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8432 for 811 contacts (10.4/contact) +
2D Compatibility (PS) -13046 + (NN) -679 + (LL) 3512
1D Compatibility (HY) -2000 + (ID) 1300
Total energy: -5081.0 ( -6.27 by residue)
QMean score : 0.212
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