Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILFIGDVVGSIGRDAITEYLPQLKKKYKPTITVINGENAASGRGITEKIYKDFLELGANAVTLGNHTWDNRDIFEFIDEAKYLVRPANFPDDTTPGTGMVFVKSNQHEIAVINMQGRTFLADLDDPFRKMDYLIEEAKKRTNIIFVDFHAETTSEKEAMGWYLDGRVTAVVGTHTHVQTSDNRILPEGTAYLTDTGMTGPYDAILGMEKEAVIRRFKTALPTRFEVPKTGRAVLSGCLITLDESTGKAQKIDRILINEDHPFSFD
2Z06 Chain:D ((1-220))
MRVLFIGDVMAEPGLRAVGLHLPDIRDRYD--LVIANGENAARGKGLDRRSYRLLREAGVDLVSLGNHAWDHKEVYALL-ESEPVVRPLNYPPGT-PGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEEK--ADYVLVEVHAEATSEKMALAHYLDGRASAVLGTHTHVPTLDATRLPKGTLYQTDVGMTGTYHSIIGGEVETFLARFLTGRPQPF-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2Z06.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119340 for 1841 contacts (-64.8/contact) +
2D Compatibility (PS) -24109 + (NN) -13844 + (LL) 2324
1D Compatibility (HY) -18400 + (ID) 4950
Total energy: -178319.0 ( -96.86 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_2Z06.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z06-query.scw
PDB file :
Tito_Scwrl_2Z06.pdb
: