Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VAKFTYDVVIIGSGASGTTVAFEAQAA-GLKVAIVEERN---------WGGTCVLRGCDPKKVLI-GA------REARNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLASFQEA-GIETFFGAASFQDSHSLQVGD---------DLIYAEKIVIATGATPSTLKVEGKEYIQTSDDFLSLEKLPDSVVFIGGGYISFEFASIALA---AGRDVHIIHHNSEPLKKFDPDFVAALVANIKDEGIHFHFDTDITKIE-NDGGKLHIKGKDSFSLQTDLIIGATGRMPNIAHLSLENASIDYTKKGIVVNEKLQTPNNPHIYACGDVAATKGAPLTPVVSLEAALVAKNVIGVNEKIT-YPAIPSVVFTSPKLASIGISTEEAKANPEKYQIKNHDTTS-WYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIAILMKANLTLADLQSVIFAYPSPASDLTALN |
| 2WPC Chain:A ((8-474)) | -----FDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEFDGSSVKA----NWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQMPAIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDI--TDRLMLTPVAINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSM- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WPC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228624 for 3688 contacts (-62.0/contact) +
2D Compatibility (PS) -46625 + (NN) -14280 + (LL) 1336
1D Compatibility (HY) -27200 + (ID) 6400
Total energy: -321793.0 ( -87.25 by residue)
QMean score : 0.393
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