Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRLGSHVSMSGKKMLLGASEEAASYGSNTFMIYTGAPQNTRRKPIEELNIE---AGLEHMKAHDMADIVVHAPYIINIGNSVKPETFELGVNFLQSEIERTRALGAKQIVLHPGAHVGEGADK-GIKQIIQGLNEALIHDQDVQIALETMAGKGSECGRTFEELAQIIDGVTHNELLSVTFDTCHTHDAGYDIVN--DFDGVLNQFDKIVGIDRLKVLHINDSKNERGAHKDRHANIGFGHIGFDALHYIVHHPQLADVPKILETPYVGGDKASKKAPYKWEIAMLKNGEFDPDLLNKIQNS |
| 2NQJ Chain:B ((1-262)) | MKYIGAHVSAAGG--LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH-YTSAQILPHDSYLINLGHPVT-EALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILQT------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123235 for 2220 contacts (-55.5/contact) +
2D Compatibility (PS) -27427 + (NN) -11295 + (LL) 1768
1D Compatibility (HY) -16000 + (ID) 4400
Total energy: -180589.0 ( -81.35 by residue)
QMean score : 0.477
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