Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MSKTVV-RKNESLEDALRRFKRTVSK-SGTLQES-----RKREFYEKPSVKRKKKSEAARKRKF-------------------
2KL8 Chain:A ((1-85))
MEMDIRFRGDDLEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRITGVPEQVRKELAKEAERLAKEFNITVTYTIRLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2KL8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 25428 for 334 contacts (76.1/contact) +
2D Compatibility (PS) -6275 + (NN) -2226 + (LL) 0
1D Compatibility (HY) -800 + (ID) 650
Total energy: 15477.0 ( 46.34 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_2KL8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KL8-query.scw
PDB file :
Tito_Scwrl_2KL8.pdb
: