Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNIKSAIKRVKTAETRNSRNASQRSAMRTAIKK-FDEAAANNADNAKDLYVEASKKLDSAVSKGLIHKNNAARNKSRLAAKLAK
2UUC Chain:T ((11-88))
-----SALKRHRQSLKRRLRNKAKKSAIKTLSKKAIQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKV--
General information:
TITO was launched using:
RESULT:
Template:
2UUC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8512 for 470 contacts (18.1/contact) +
2D Compatibility (PS) -8479 + (NN) -2517 + (LL) 464
1D Compatibility (HY) -1600 + (ID) 1450
Total energy: -5070.0 ( -10.79 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_2UUC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UUC-query.scw
PDB file :
Tito_Scwrl_2UUC.pdb
: