Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIGIIGAMEEEVELLKNSMSSVEEIVIGGAKFYIGEIASKEVVLLESGIGKVNAALGTTLMADRFKPEVIINTGSAGGMAEGLAVGDVIISDRLAYGDVDVTEFGYTYGQVPRMPAFYQGDAVLLKKAETIYREYFATSENKAVYGLVVTNDSFIMRPDQHEIIRTFFPDVKAVEMEAAAIAQVAYQFDIPFLIIRAISDLANQEATISFDEFIHLAAKQSATCIIELLKTI
1Y6Q Chain:A ((11-239))
MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVALLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAGFKAD----DKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSSLMVESLVQKL
General information:
TITO was launched using:
RESULT:
Template:
1Y6Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -174833 for 2043 contacts (-85.6/contact) +
2D Compatibility (PS) -24982 + (NN) -12601 + (LL) 688
1D Compatibility (HY) -22400 + (ID) 5700
Total energy: -239828.0 ( -117.39 by residue)
QMean score : 0.668
(partial model without unconserved sides chains):
PDB file :
Tito_1Y6Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y6Q-query.scw
PDB file :
Tito_Scwrl_1Y6Q.pdb
: