Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNTKGKKITIIISIIILILVIATFSGYYYVKSQLEPKDEASKEKITVEIPAGSSISDISTILEDKKVINNASIFSFYVKYNNDTNLKAGNYELSPAMNTDQIVKKMQEGKTVAP--AKLVIPEGYTLDQIADRIV-----AYQPKLKKADVLKTMDDPEFVASMI--KAYPETVTNDVLNKSIKHPLEGYLYPATYTFKGTDVSAEQIITEMVKATDVNIAKYRDELTKQKMSVHKFLTMSSIIEKEATENVDRKMIASVFYNRLAKDMRLQTDPTVLYALGEHKSKTTYKDLEVDSPYNTYKNNGLPPGPISNSGDSSMEAALYPEKSDYLYFLANTKTGKVYFSKTLEEHNKLKEEHITKNN |
| 4C9B Chain:B ((8-291)) | ------------------DPLLTRTGGAYIPPAKLRMKNSLAYQRMSWEALKKSINGLINKV--------NISNISIIIQELLQENIVRG-----RGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERP--------------TDDSVE-VAIGFLKECGLKLTQV-----SPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPIILEGLDLVEEDDQFTHMLPLE---------------------DDYNPEDVLNVFKMDP------------NFMENEEKYKAIKKEIL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10844 for 1898 contacts (5.7/contact) +
2D Compatibility (PS) -27051 + (NN) -435 + (LL) 4308
1D Compatibility (HY) -10000 + (ID) 2550
Total energy: -24884.0 ( -13.11 by residue)
QMean score : 0.183
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