Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKENKVQWQVIAGIILALIIAIFAVINVDPVEVNFLFAQAEWPLILIILGSVLCGCLIIFFLNIAKSRGMKKKVKQLTTEKAELERQLAAAKAMKTHSSKVEKRDTENAVDTTK
1ZXA Chain:A ((17-44))
-----------------------------------------------------------------------ERIKELEKRLSEKEEEIQELKRKLHKCQ---------------
General information:
TITO was launched using:
RESULT:
Template:
1ZXA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5958 for 103 contacts (57.8/contact) +
2D Compatibility (PS) -3403 + (NN) -4668 + (LL) 8648
1D Compatibility (HY) -400 + (ID) 250
Total energy: 5885.0 ( 57.14 by residue)
QMean score : 0.904
(partial model without unconserved sides chains):
PDB file :
Tito_1ZXA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZXA-query.scw
PDB file :
Tito_Scwrl_1ZXA.pdb
: