Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRKIIVGSRRSKLALTQSNWVINKLKENYPEFDFEIKEIVTKGDRILDVTLSKVGGKGLFVSEVEQALSDEAIDFAVHSMKDVPSSLKEGLII--GAIPKRESPLDCFVFNQV---NSLDELPQGSVIGTSSLRR-AAQLLKHR-------PDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWLENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKKLNGGCEIPIAGFATRANEFVQFKGLVGNADGSIILESEQVGANPSEIGNKVAEDLLSEGADTIIKELRNV |
| 2X26 Chain:A ((2-161)) | -PEALRIGYQKGSIGMVLAKS-HQLLEKRYPESKISWVEFPA-GP------------------QMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPIKTVADL-KGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQP--TYLTPADARAAFQQGNVDAWAIWDP------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X26.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28926 for 965 contacts (-30.0/contact) +
2D Compatibility (PS) -16113 + (NN) -7392 + (LL) 10472
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -46159.0 ( -47.83 by residue)
QMean score : 0.376
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