Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VIPAKLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFNSNQLLPYLDYDLISENPKILCGFSDITALATAIYTQTELITYSG-AHFSSFSMEKGL-DYVMESFSDCLLQKEP----FALKESATWSDD--EWYLDQENRNFIPNE----GLVVMQPGVAEGIIIGGNLCTLNLLQGTEYMPNLA-GTILFIEDDFMTIPETFDRDLESLLSQPGADEIEGMVIGRFQQKTAMTAEKLAYIIETKTALQK-IPVISGADFGHTQPIATFPIGGTARIDTNQTDKIQIIRH |
| 4IIY Chain:A ((35-354)) | LLAAPLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDNSNSLLPFLDYDAIIANPKIIIGYADTTALLAGIYAKTGLITFYGPALIPSFGEHPPLVDITYESFIKILTRKQSGIYTYTLPEK--WSDESINW---NENKILRPKKLYKNNCAFYGSGKVEGRVIGGNLNTLTGIWGSEWMPEIRNGDILFIEDSRKSI-ATVERLFSMLKLNRVFDKVSAIILGKHELFDCAGSKRRPYEVLTEVLDGKQIPVLDGFDCSHTHPMLTLPLGVKLAID------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185987 for 2634 contacts (-70.6/contact) +
2D Compatibility (PS) -32211 + (NN) -8264 + (LL) 1256
1D Compatibility (HY) -21200 + (ID) 5600
Total energy: -252006.0 ( -95.67 by residue)
QMean score : 0.486
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