Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKILIGGIRLYQKYISRFTPAT--CRFYPTCSAYGIEAIQTHGALKGSYLAIRRISKCHPFHKGGLDFVPPKKDKNADSEHSCKVHHHH
1Q38 Chain:A ((1-89))
MRGSNAPQPSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTSTSTPGSRSHH-HHHH
General information:
TITO was launched using:
RESULT:
Template:
1Q38.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5614 for 473 contacts (-11.9/contact) +
2D Compatibility (PS) -9330 + (NN) -947 + (LL) 192
1D Compatibility (HY) 1600 + (ID) 900
Total energy: -14999.0 ( -31.71 by residue)
QMean score : 0.088
(partial model without unconserved sides chains):
PDB file :
Tito_1Q38.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q38-query.scw
PDB file :
Tito_Scwrl_1Q38.pdb
: