Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQWTVKEMAAYVGISADTLRYYEKNKIIVPNRLE--NGYRVYNTEHLLELKFILVMKYARFSLSEIKLMMEWLRSEPSVACNTASKELLALKAAEIKQTIAHYTKIAALLEELPQIDEVQDYSTVQKDVNTFVEHIFTDIRKDGF
3Q5R Chain:A ((6-70))
---YSIGEVSKLANVSIKALRYYDKIDLFKPAYVDPDTSYRYYTDSQLIHLDLIKSLKYIGTPLEEMK------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3Q5R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40302 for 400 contacts (-100.8/contact) +
2D Compatibility (PS) -6799 + (NN) -4112 + (LL) 7576
1D Compatibility (HY) -7200 + (ID) 950
Total energy: -51787.0 ( -129.47 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_3Q5R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q5R-query.scw
PDB file :
Tito_Scwrl_3Q5R.pdb
: