Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYLCENENAYRRRNSGNLEIEMSEITLRNRKPKRKIGKWIAIILGIIIVLVVAAFLYFRYAEKPVTNAETEALDRISGQVDLKTTDQFYLYN-GPKEVYYVLTGKNSKNKNIIVWVPKKKSDKVYVKF------ASDGITEQQARDKVTKEKKPKKILHVNLGMEKETPIWEVAYLDKNDKLNYFDINFETGEWYREIENL |
3DB7 Chain:A ((18-125)) | ------------------------------------------------------------------------QQFIKQHFSDSKVALAKMESDFLY-KSYEVIFTN--G--NKVEFDKKGN--WEEVDCKHTSVPVAIIP-AAIQKYVTTNYPDAKVLKIERD----KKDYEVKLSNR---TEL-KFDL-KFNLIDI---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43729 for 640 contacts (-68.3/contact) +
2D Compatibility (PS) -11091 + (NN) -5810 + (LL) 7848
1D Compatibility (HY) -1200 + (ID) 650
Total energy: -54632.0 ( -85.36 by residue)
QMean score : 0.512
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