Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHIALIAHDEKKDLMVGFATAYKHLLEPHQLYATGTTGLRIIEATGLTVHRFKSGPLGGDQQIGARISENKMDLVIFLRDPLTAQPHEPDVTALIRLCDVYEIPLATNIGTAEILIRGLGAGFLDWRDLRRNDE
1IK4 Chain:F ((13-129))
-HIALVAHDHCKQMLMSWVERHQPLLEQHVLYATGTTGNLISRATGMNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNVATADFIIQS----------------
General information:
TITO was launched using:
RESULT:
Template:
1IK4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92678 for 931 contacts (-99.5/contact) +
2D Compatibility (PS) -12175 + (NN) -286 + (LL) 920
1D Compatibility (HY) -13200 + (ID) 3200
Total energy: -120619.0 ( -129.56 by residue)
QMean score : 0.367
(partial model without unconserved sides chains):
PDB file :
Tito_1IK4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IK4-query.scw
PDB file :
Tito_Scwrl_1IK4.pdb
: