Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVAISGGGTGGHVYPALALIRELKKSHPEAEFLYIGTEKGLEAGIVKREGIPFEAIEITGFKR---------SLSLENI-KTVMRFLSGAKKSKQILRDFKPDVVIGTGGYVCGPVVYAAAKLKIPTLIHEQNSVAG-----------------------L---TNKFLSR-------------YTDKVAICFEEVSDSF---ASEKIVFTGNPRASEVVGVDSEGALEAYGLVSGKPTVLVFGGSRG--ARGVNEAVEAVLPEWNNRDFQLLYVTGDVHYEKIKDSLAELNLGNHISVQPFIYDMPKILNAVTLVVSRAGATTLAELTALGVPSILIPSPYVTANHQENNARALEKNNAAIVITEAELKNTDLMATVDSILNDEAKLNSMKLSAKQMGRPDAAAKLVEAVLSIMK |
3RSC Chain:A ((21-412)) | AHLLIVNVASHGLILPTLTVVTELVRRG--HRVSYVTAGGF--AEPVRAAGATVVPYQSEIIDADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPF-IAGQLLAARWRRPAVRLSAAFASNEHYSFSQDMVTLAGTIDPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTFDDRFVFVGPCFDDRRFLGE-----WTRPADDLPVVLVSLG-TTFNDRPGFFRDCARAFDG---QPWHVVMTLGGQVDPA--A-L--GDLPPNVEAHRWVPHV-KVLEQATVCVTHGGMGTLMEALYWGRPLVVVPQS----FDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVAADPALLARVEAMRGHVRRAGGAARAADAVEAYL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RSC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168835 for 2980 contacts (-56.7/contact) +
2D Compatibility (PS) -37144 + (NN) -17941 + (LL) 1240
1D Compatibility (HY) -14000 + (ID) 2650
Total energy: -239330.0 ( -80.31 by residue)
QMean score : 0.561
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