Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VSLEEALLFREATVTDLKSIMNVENAA------------FTVPWTEAAFRNEFIINQYA--------YYLLAIYKEQVVGYAGVWLVLDEGHITNIAIHPDYQGNHYGEALLREMIRVAKERGVVRMTLEVRVSNDVAQGLYKKLGFQDGAIRKNYYPDTKEDALVMWVDL
3FIX Chain:A ((30-168))
---------RKLSIEDLETLIEVARESWKWTYAGIYSEEYIESWIREKYSKEKLLNEIVRSQSNLDILFLGAFADSTLIGFIELKIIANKAELLRLYLKPEYTHKKIGKTLLLEAEKIMKKKGILECRLYVHRQNSVGFSFYYKNGFK-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3FIX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81433 for 788 contacts (-103.3/contact) +
2D Compatibility (PS) -12706 + (NN) -2850 + (LL) 2640
1D Compatibility (HY) -11200 + (ID) 1300
Total energy: -106849.0 ( -135.60 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_3FIX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FIX-query.scw
PDB file :
Tito_Scwrl_3FIX.pdb
: