Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVLVFAAFIVLFSFSFLSTGLTAQAALKDGTYSVDYTVIQGDSDSASMANDYFDKPATVTVNGGKSTVSLQVNH-SKWITGLWVEGN----AVSVTSKNASSDTRKVSFPVSTLSNPVNAKIKVDIDDDDLNYHHEYQIKLRFDEGSAKALAGAVKSSDNNTTTPATKSDSSNKVTNPKSSDSSQMFLYGIIFVATGAGLILLKRRAIFK |
| 3QZM Chain:A ((12-122)) | -----------------------------------INFQVQKDGSSEKSAMDDYMQHPGKVIKQNNKYYFQTVLNNASFWKEYKFYNANNQELATTVVNDNKKADTRTINVAVEPGYKSLTTKVHIVVPQ--INYNHRYTTHLEFEKA---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QZM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26039 for 693 contacts (-37.6/contact) +
2D Compatibility (PS) -12103 + (NN) -6261 + (LL) 6528
1D Compatibility (HY) -6000 + (ID) 1300
Total energy: -45175.0 ( -65.19 by residue)
QMean score : 0.447
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