Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENRISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLD--YAYLAFDTPIQKVADTIKAIKTFNLRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNE--DGKLTGHITDGLGFIANLRDA-SVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQTVASIKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVFRKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGKDMPVSEVKDLYFN |
| 2O7Q Chain:A ((228-509)) | --RRIGPDTKVYGIIGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDN----LVSFLQAYSSSDFAGFSCTIPHKEAALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGL-------TVVVIGAGGAGKALAYGAKEK-AKVV----IANRTYERALELAEAIGGKA-------LSLTDLDNY--E--DGMVLANTTSMGMQPNVEETPISKDAL-KHYALVFDAVYTPRITRLLREAEESGAITVSGSEMFVRQAYEQFEIFTGLPAP----KELYWQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O7Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118950 for 2252 contacts (-52.8/contact) +
2D Compatibility (PS) -27183 + (NN) -8125 + (LL) 2404
1D Compatibility (HY) -16400 + (ID) 4750
Total energy: -173004.0 ( -76.82 by residue)
QMean score : 0.571
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