Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MFQLKANGTDVKTEVISGFTTFLTMVYIVVVNPAILSAAGVPFNTVFMATIISAVIGTLWMAIFANYPIAIAPGLGMNAYFVTVVTTQKLDYSVAFAAVFVAGIIFLLLSLTPLREKIIEAIPHNLKAGITAGIGLFIAFLGFRMTGIIVSNDSNLVGLGDLHSKEAILAIVGLLITLILLALNVKGALFIGMIATGIIAFIT--GELKFTDGIVKLPPMPEFVFTNPIHAFGDVMSYGLYAVVLSFLLITIFDTTGTMIGVAKKAGLMKGESLPNAKQALMADAVATSVGSMFGTTPTSAYIESSAGVATGGRTGLTTLTVAILFMVSAFFAPLVGAVSGISAITAPALIVVGSMMIGAVKEIDWDTLDEAFPAFLVILAMPLTSSIAIGLAFGFISYPVLKVFTGKWRELNWFLIVIAVLFFILVAFLPH |
| 2E2O Chain:A ((1-299)) | MMIIVGVDAGGTKTKAVAYD---CEGNFIGEGSSGPGNYHNVGLTRAIENIKEAVKIAAKG----------------------------------EADVVGMGVAGLD------SKFDWENFTPLASLIA------------------PKVIIQHDGVIALFAETLGEPGVVVIAG----------------------TGSVVEGYNGKEFLRVGG---------RGWLLSDDGSAYWVGRKALRKVLKMM-------DGLENKTILYNKVLKTINVKDLDELVMWSYTSSC--------QIDLVASIAKAVDEAANEG----DTVAMDILKQGAELLASQAVYLARKIGTNKVYLKGGMFRS--NIYHKFFTLYLEKEGIISDLGKRSPEIGAVILAYKEVGCD-----------------------IKKLISD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E2O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -332711 for 2732 contacts (-121.8/contact) +
2D Compatibility (PS) -31117 + (NN) -2793 + (LL) 13096
1D Compatibility (HY) -3200 + (ID) 1450
Total energy: -358175.0 ( -131.10 by residue)
QMean score : 0.203
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