Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MNSDIIVADFWKNNEEILTDFDKDSFCESWTE----NEMW-SIEFKVAQTPKNAHCYSFLDYESSVYFRG----QEFVVKQLSHDAVGK---------------TLSKDIRAPHIYYTCQDGRQDDAITGSFT---------------LEQCLTHIFKTDNRGFSWEIIDPSNILEKVQQENFGNN----NYLTLIDQLLDDYGVVVIPDNRHLVFKPREIYGA-KTENFIRYKYNTDEASFDIDTLSLKTKIKGYGKVDSNGNNYFSPITYTSPEVEKWGIRWQEPVSDERYTVAGNMQRRL-KLELQDYPATTGSVILKNDYE-CEKGDYVLFIYEPLGIDYDVQIVA---YKKYPFTIKAPEITLSNNKKSIVSIMAQLAKVLKGAK------- |
| 4I6J Chain:B ((35-428)) | DWGNLLQDIILQVF--KYLPLLDRAHASQVCRNWNQVFHMPDLWRCFEFELNQPATSYLKATHPELIKQIIKRHSNHLQYVSFKVDSSKESAEAACDILSQLVNCSLKTLGLISTARPSFMDLPKSHFISALTVVFVNSKSLSSLKIDDTPVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRELALNYHLLSDELLLALSSEKHVRLEHLRIDVVSENPGQTHFHTIQKSSWDAFIRHSPKVNLVMYFFLYEE-----EFDPFFRYEIPATHLYFGRSVSKDVLGRVGMTCPRLVELVVCANGLRPLDEELIRIAERCKNLSAIGLGECEVSCSAFVEFVKMCGGRLSQLSIMEEVLIPDQKYSLEQIHWEVSKHLGRVWFPDMMPTW |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I6J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1688 for 2372 contacts (-0.7/contact) +
2D Compatibility (PS) -34914 + (NN) -2797 + (LL) 112
1D Compatibility (HY) -9200 + (ID) 2250
Total energy: -50737.0 ( -21.39 by residue)
QMean score : 0.102
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