Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKYGILALALTAALTLSACGGKEEPEAANQKVQTITVGTGTQFPNVCFLDENGKLTGYDVELVKEIDKRLPGYKFKFKTMDFSNLLVSLGAGKVDIVAHQMEKSKEREKKFLFN---------------------DVAYNNFPLQLTVLDSNNSINS-TKDLAGKRV-ITSATSNGALVLKKINEEQGNNFEIAYEGQGSNDTANQLKTGRADATI-STPFAVDFQNKTSAIKEKVVGDVLSNA----KVYFMLGKDETKLSKKVDEALQSIIDDGTLKKLSEKWLGADYSKEQY |
| 4PP0 Chain:A ((5-257)) | ----------------------------------KSITIATEGSYAPYNFKDAGGKLIGFDIDLGNDLCKRM-NIECKFVEQAWDGIIPSLTAGRYDAIMAAMGIQPAREKVIAFSRPYLLTPNTFLTTADSPLLKTQVAIENLPLDNITPEQKAELDKFTKIFEGVKFGVQAGTSHEAFMKQMMPSVQISTYDTI------DNVVMDLKAGRIDASLASVSFLKPLTDKPDNKDLKMFGPRMTGGLFGKGVGVGIRKEDADLKALFDKAIDAAIADGTVQKLSQQWFGYDASP--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PP0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67923 for 1698 contacts (-40.0/contact) +
2D Compatibility (PS) -23753 + (NN) -4035 + (LL) 2852
1D Compatibility (HY) -13600 + (ID) 3200
Total energy: -109659.0 ( -64.58 by residue)
QMean score : 0.482
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