Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYRLLSIAFFGIAVICLLFPWMSSGIDAATFELVYEPAYKLIWMQPIIIVGYLGFLCTIFIPKFQRGKNRIVPFIGILILVLGLLNLAVRPLFG-FDSFNFSIIDAYVSELVEPAFLIAVSASILSLIMYAIYLKKSENL
3S3D Chain:A ((31-58))
-------------------------------------------------------------------------------LVLGFLALIVGSLFGPFQALNYGNVDAY---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3S3D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5599 for 106 contacts (-52.8/contact) +
2D Compatibility (PS) -2627 + (NN) -614 + (LL) 11100
1D Compatibility (HY) -5200 + (ID) 750
Total energy: -3690.0 ( -34.81 by residue)
QMean score : -0.170
(partial model without unconserved sides chains):
PDB file :
Tito_3S3D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S3D-query.scw
PDB file :
Tito_Scwrl_3S3D.pdb
: