Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASEEKIYDVIIIGAGPAGMTAALYTSRADL-DTLMIERGVPGGQMVNTAEVENYPGFDSIL-GPDLSDKMLSGAKQFGAEYAYGDIKEVVDGKE--FKTVTAGSKTYKARAIIIATGAEHRKLGAAGEEELSGRGVSYCAVCDGAFFKNRELIVVGGGDSAVEEGTYLTRYADKVTIVHRRDKLRAQQILQDRAFKDEKVDFIWNSTVEEIVGDGKKVTGAKLVSTVDGSESIMPVDGVFIYVGLVPLTKAFLN-----LGITDDEGYIVTDEEMRTNLPGIFAAGDVRAKSLRQIVTATGDGGLAGQNAQKYVEELKESLEAEAAK |
3R9U Chain:A ((6-314)) | --------DVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGKTELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRAAPSTVEKVKKNEKIELITSASVDEVYGDKMGVAGVK-VKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAMAYIESL---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3R9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -170087 for 2589 contacts (-65.7/contact) +
2D Compatibility (PS) -31861 + (NN) -7029 + (LL) 2088
1D Compatibility (HY) -20000 + (ID) 5850
Total energy: -232739.0 ( -89.90 by residue)
QMean score : 0.565
|
|
|