Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIRVPATTANLGPGFDSCGLALT-LYLTLDIGA-EADSWYIEHNIGGGIP-HDETNVIIETALNLAPN---LTPHHLVMTCDIPPARGLGSSSAAVVAGIELANTLAELNLSKEEKVRIAAEIE------GHPDNVAPAVLGNWVVGAKLDGEDFYVRHLFP-DCALIAFIPKAELLTSESRGVLPDTLPFKEAVQASSIANVMIAAILRNDMTLAGEMMERDLWHEKYRSQLVPHLAQIRDVAKNQGAYAACLSGAGPTVLVFAPRNLANKLQTSLQTLEIDADVLLLDVEGSGAEVFR |
1H72 Chain:C ((3-295)) | VRVKAPCTSANLGVGFDVFGLCLKEPYDVIEVEAIDDKEIIIEVD-DKNIPTDPDKNVAGIVAKKMIDDFNIGKGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASSGAKHADNVAPAIFGGFTMVTNYEP-LEVLHIPIDFKLDILIAIPNISINTKEAREILPKAVGLKDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVRGKLIPNYFKIKEEVKD-KVYGITISGSGPSIIAFPKEEFIDEVENILRDY--YENTIRTEV-GKGVEV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181346 for 2555 contacts (-71.0/contact) +
2D Compatibility (PS) -30950 + (NN) -14920 + (LL) 1072
1D Compatibility (HY) -16000 + (ID) 4000
Total energy: -246144.0 ( -96.34 by residue)
QMean score : 0.518
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