Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKRGLLLVSVLMLFIFLTVACGSSEDNEESGEISTKEIELTVDDPIIPTDENGEATIEGTVDPKSKLTIDGKAVKKDDSGRFTYTYSLTNDNVAEVDVKLLAVRKNYKDEKYTITITNNSKAYNDNMVKQEAIQKEEAEKAEKERKEAEEKAKQEEEAAAAKAATTDENTPSDDTVYGTLASKDTLTKEGDAFYKDEALDVLYSTVENDEIFQVLIQLGDESTIRKDLDKNHLTELAR-DYMESDATLIQTVSDESFVYESPSINKTYTVDYMLNDEGYVIAVYVTQAK |
| 4FO5 Chain:A ((70-135)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYDLRKGFK-NFLINDEGVIIAANVTPEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FO5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -357 for 328 contacts (-1.1/contact) +
2D Compatibility (PS) -6594 + (NN) -839 + (LL) 14992
1D Compatibility (HY) -3600 + (ID) 900
Total energy: 2702.0 ( 8.24 by residue)
QMean score : 0.114
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