Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKLVLMGLPGAGKGTQAEQIVEKYNIPHISTGDMFRAAMKNNTELGRKAKSFMDNGDLVPDEVTNGIVRERLSEDDAKDGFLLDGFPRTVEQAQELENILSDLGTELDAVINIDVEKDVLMKRLTGRWICRTCGKTYHEIYNPPKVPGKCDLDGGELYQRDDDKKETVEKRLNVNMKQTKPLLDFYSEKGKLHNINGEQEIKDVFVDVEKILASF
4QBF Chain:A ((1-215))
MNIVLMGLPGAGKGTQAERIVEKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVRERLSKSDCERGFLLDGFPRTVAQAEALEELLEEMGRPIDYVINIQVDKEELIARLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVTKRLEVNMKQTAPLLAFYDSKEVLVNVNGQQDIQDVFADVKVILGGL
General information:
TITO was launched using:
RESULT:
Template:
4QBF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66157 for 1659 contacts (-39.9/contact) +
2D Compatibility (PS) -23813 + (NN) -16814 + (LL) 0
1D Compatibility (HY) -24400 + (ID) 7250
Total energy: -138434.0 ( -83.44 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_4QBF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QBF-query.scw
PDB file :
Tito_Scwrl_4QBF.pdb
: