Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIPSFLKLVEIQTKIASVFPFMLGTLFVVY-QYDMFKPINTLIIFGSMLIFDLTTTAINNYMDYRKATDNHDYDYRTTSNVIGQEQIPVRTVIITIFLMFFIATGLGVWLVFRTDLLVLLIGFVCFCIGILYTFGPVPLSRMPLGEIFSGVTMGFGIFFLAVYVNAYDAGIANLLWQGEMVTIQFNLIEIIRIGVVSLPCIFTIANIMLANNLCDLDEDIRNHRYTLPYYIGRKMGVLLFNTLYYASFLAVVVSVAINFLHPIMLLSLITIYPVYRNLVKFNKEQVKSKTFVIGIRNFVLINATLTILMAVSVVLQQLT |
| 4TQ3 Chain:A ((15-301)) | ---SKYLRLLRPVAWLCFLLPYAVGFGFGITPNASLQHAVLGLLSFAFWMAFSFTINALYD-----RDVDRLHDGLNLSMQPLVTGEISVREAWL--YCIAFLALSLATAAAINEKFFLAMLGANI--IGYVYSAPP-RFKAWPVMDVICNALAAVLAFYAGLSIG------------GAEVPIAIYPAAFFLAATFYIPTAVSDYEFDKKAGLKNTPVFFGPERALKSLYPLSAITVILWAYVFLMAE-----RIEIKVISPLIIAYTLIYTFIINS--RWDGEKLNVSP--NLILTPFGIISALFIAYGFAVISV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TQ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -284840 for 2375 contacts (-119.9/contact) +
2D Compatibility (PS) -28391 + (NN) -1804 + (LL) 4400
1D Compatibility (HY) -18800 + (ID) 2050
Total energy: -331485.0 ( -139.57 by residue)
QMean score : 0.271
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