Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MDSAYVFDSEQATKLLMKNYELVKTSGVSFIDKRIRFLIARLFAGNNEVVNPERFNEINKEIKRQLGMFTALNGNVRASLVGLLMANNNASRESVQQVIANYNTLIQAGFQRTEYTYFAAYLLLESENPTKTAQK--------AKTIHQLFKKDHPFLTKSEDVTTA-VFLANLPEENTTELAEVTEYYFQEFAAKGFRKNDSLQFLATTGTLLYGEKDSKFIRRVDNIVEELRQKGIKVKPIHYSSIGILAFVMDGRKIDSGLVNLIDELQQQP-G-LRFGR-EFVTALAISLYTEKQS-GQMSKEQLEGLMVNVHILIAMEQAAAVSAAAAASAAAASS- |
| 1ZTU Chain:A ((19-339)) | PLPFFPPLYLGGPEITTENCEREPIHIPGSIQPHGALLTADGHSGEVLQMSLNAATFLGQEPTVLRGQTLAALLP-------EQWPALQAALPPGCPDALQYRATL--DWPGHLSLTVHRVG-----ELLILEFEPTEPHALRNAMFALESAPNLRALAEVATQTVRELTGFDRVMLYKFA-PDATGEVIAEARREGLHAFLGHRFPASD-----------IPAQARALYTRHLLRLTADTRAAAVPLDPVLNT--------QTNAPTPLGGAVL---RATSPMHMQYLRNMGVGSSLSVSVVVGGQLWGLIACHHQTPYVLPPDLRTTLEYLGRLLSLQVQVKEAHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZTU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10905 for 2250 contacts (-4.8/contact) +
2D Compatibility (PS) -29255 + (NN) 3977 + (LL) 3460
1D Compatibility (HY) -4000 + (ID) 1600
Total energy: -38323.0 ( -17.03 by residue)
QMean score : 0.222
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