Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDINMFILYFFIYSVLGWAWEEVFCSISEKKLVYRGFLYGPYCPIYGFGVTAVLMMILPFQNNLWALFIFSMIICTVIEYVTATILEALFHTTWWDYHNWPLNVKGRICLPISIFWGFACIIVVRFLHPLVTEFADWILSWGGWIIPALIVVLMLIDTIKSVTSMLSFQKALAEFNEKLNAQANELKASVKERAKEFEEGLLKK--QENVDMKIAEIEAKRKQDKELAASMRKL-KFNERRMLKSFPKMKVKRAAPFKNLNKSLLRVDKLKRK |
2I1K Chain:A ((506-575)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------RRTLAERNERLHNQLKALKQDLARSCDETKETAMDKIHRENV-----------RQGRDKYKTLREIRKGNTKRRVDQFENM------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16175 for 290 contacts (55.8/contact) +
2D Compatibility (PS) -7462 + (NN) -8045 + (LL) 19216
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: 16784.0 ( 57.88 by residue)
QMean score : 0.345
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