Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VRHVVIFCASILNRFFASVECVKRRLNPL----EAYLVVMSNAERAGGLVLAATPKMKQEHHIKTGSRMYELPTWDKRIIIAPPRMKLYLKVNAMIQAIFRRYVPAEFIHVYSIDECFLDVTGSHLLFGSTEEIVRKIQRDILEELRLYVTVGIGDNPLLAKLALDNVAKNRDDGIAEWRYEHVPETIWKIRHLD--DVCGIGRRTAVRLQKMGIFNMYQLSQTPPQVLKNVMGVVGEQLYYHAHGIDYSLLNEKY-VPVSKSYGKSQILEKDYHVPAEVEIVIREMVEEVAMRLRQN-----HVDTAVIHLSVGYSKYSIKKGFSHQAKIPPTSSSHALIPYFLQLFRRYDEREPVRSIAISCGKITLKTGLQLNLFEDFTQTLNHEQLEITVDKIRSRYGFKSLMHASSLLNGATGLKRSEMVGGHKG |
| 2ATL Chain:A ((10-349)) | ---IVLFVD--FDYFYAQVEEV---LNPSLKGKPVVVCVFSGRFEDSGAVATANYEARK-FGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREY--SEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPN---GIKVIDDEEVKRL---IRELDIADVPGIGNITAEKLKKLGI---NKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKE-----TAYSESV--KLLQKILEEDERK-IRRIGVRFSKFI-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ATL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -270916 for 2506 contacts (-108.1/contact) +
2D Compatibility (PS) -35094 + (NN) -7663 + (LL) 5416
1D Compatibility (HY) -17600 + (ID) 4850
Total energy: -330707.0 ( -131.97 by residue)
QMean score : 0.437
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