Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFFIDTANVEEIKKANRMGFISGVTTNPSLVAKEGRDFNEVIQEITSIVDGPISGEV---VSLEADEMIAEGRVIAKIHPN-------MVVKIPMTGEGLAAVKVL-TEEGIKTNVTLVFSATQALLAARAGATYVSPFLGRLDDI---------GDDGLVLIRDIADIFEIHGIPTEIISASVRHPIHVIECAKAGADIATVPFKVFEQMLKHPLTDSGIDKFLADWEAAKK
3CQ0 Chain:A ((96-266))
--------------------------------------------QILKVVPGRVSTEVDARLSFDKKATVKKALHIIKLYKDAGVPKERVLIKIASTWEGIQAARELEVKHGIHCNMTLLFSFTQAVACAEANVTLISPFVGRIMDFYKALDYTAETDPGVLSVKKIYSYYKRHGYATEVMAASFRNLDEL--KALAGIDNMTLPLNLLEQLYE--------------------
General information:
TITO was launched using:
RESULT:
Template:
3CQ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89563 for 1141 contacts (-78.5/contact) +
2D Compatibility (PS) -16069 + (NN) -3093 + (LL) 4544
1D Compatibility (HY) -13600 + (ID) 2650
Total energy: -120431.0 ( -105.55 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_3CQ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CQ0-query.scw
PDB file :
Tito_Scwrl_3CQ0.pdb
: